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Table 1 Sequencing reads and alignment statistics

From: An efficient rRNA removal method for RNA sequencing in GC-rich bacteria

Sample name

Total reads

Mapped reads

Unmapped

% rRNA reads

% mRNA reads

% intergenic reads

 

Replicate 1

Replicate 2

Replicate 1

Replicate 2

Replicate 1

Replicate 2

Replicate 1

Replicate 2

Replicate 1

Replicate 2

Replicate 1

Replicate 2

Bt-totRNA

4334132

3756060

41390060

36228341

1944072

1367719

99.63%

99.95%

0.29%

0.03%

0.08%

0.02%

B-t-Mex

26092578

29736910

24866950

28271413

1225628

1465497

96.57%

99.06%

2.82%

0.49%

0.61%

0.45%

Bt-Ov

13507220

15321918

10279802

11899910

3227418

3422008

52.48%

70.13%

41.15%

24.51%

6.37%

5.37%

Bt-Mex-Ov

10377152

7905258

7970400

6382124

2406752

1523134

62.57%

45.73%

30.04%

46.11%

7.39%

8.16%