From: An efficient rRNA removal method for RNA sequencing in GC-rich bacteria
Sample name | Total reads | Mapped reads | Unmapped | % rRNA reads | % mRNA reads | % intergenic reads | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
 | Replicate 1 | Replicate 2 | Replicate 1 | Replicate 2 | Replicate 1 | Replicate 2 | Replicate 1 | Replicate 2 | Replicate 1 | Replicate 2 | Replicate 1 | Replicate 2 |
Bt-totRNA | 4334132 | 3756060 | 41390060 | 36228341 | 1944072 | 1367719 | 99.63% | 99.95% | 0.29% | 0.03% | 0.08% | 0.02% |
B-t-Mex | 26092578 | 29736910 | 24866950 | 28271413 | 1225628 | 1465497 | 96.57% | 99.06% | 2.82% | 0.49% | 0.61% | 0.45% |
Bt-Ov | 13507220 | 15321918 | 10279802 | 11899910 | 3227418 | 3422008 | 52.48% | 70.13% | 41.15% | 24.51% | 6.37% | 5.37% |
Bt-Mex-Ov | 10377152 | 7905258 | 7970400 | 6382124 | 2406752 | 1523134 | 62.57% | 45.73% | 30.04% | 46.11% | 7.39% | 8.16% |