Table 1 Genomes used in this study
From: Analysis of evolutionary patterns of genes in Campylobacter jejuni and C. coli
Genome | Size | Contigs | Genes | MLST | Source |
|---|---|---|---|---|---|
jejuni subsp. jejuni NCTC11168 | 1.64 | 1 | 1658 | ST43 (CC-21) | [12] |
jejuni subsp. jejuni RM1221 | 1.78 | 1 | 1877 | ST354 (CC-354) | [13] |
jejuni subsp. jejuni 81116 | 1.63 | 1 | 1617 | ST267 (CC-283) | [14] |
jejuni subsp. jejuni 81-176 (TIGR) | 1.70 | 1 | 1726 | ST604 (CC-42) | TIGR |
jejuni subsp. jejuni 81-176 (Yale) | 1.62 | 1 | 1730 | ST604 (CC-42) | Yale University |
jejuni subsp. jejuni 84-25 | 1.67 | 5 | 1727 | ST21 (CC-21) | TIGR |
jejuni subsp. jejuni 260.94 | 1.66 | 10 | 1696 | ST362 (CC-362) | TIGR |
jejuni subsp. jejuni CG8486 | 1.60 | 19 | 1822 | ST2943 (CC-574) | NMRC |
jejuni subsp. jejuni CG8421 | 1.61 | 20 | 1747 | ST1919 (CC-52) | NMRC |
jejuni subsp. jejuni HB93-13 | 1.69 | 35 | 1727 | ST22 (CC-22) | TIGR |
jejuni subsp. jejuni 11601MD | 1.74 | 1 | 1846 | New ST (-) | NCSU |
jejuni subsp. jejuni 1336 | 1.70 | 1 | 1755 | ST841 (-) | University of Liverpool |
jejuni subsp. jejuni 414 | 1.71 | 1 | 1806 | ST3704 (-) | University of Liverpool |
jejuni subsp. jejuni M1 | 1.62 | 1 | 1638 | ST137 (CC-45) | DTU |
jejuni subsp. jejuni IA3902 | 1.64 | 1 | 1651 | ST21 (CC-21) | Iowa State University |
jejuni subsp. jejuni CF93-6 | 1.68 | 14 | 1742 | ST883 (CC-21) | TIGR |
jejuni subsp. jejuni 327 | 1.62 | 48 | 1776 | ST230 (CC-45) | UCPH |
jejuni subsp. jejuni DFVF1099 | 1.73 | 71 | 1954 | ST21 (CC-21) | UCPH |
jejuni subsp. jejuni 305 | 1.81 | 333 | 2260 | - (-) | UCPH |
jejuni subsp. jejuni ICDCCJ07001 | 1.69 | 1 | 1802 | ST986 (-) | [15] |
jejuni subsp. jejuni S3 | 1.71 | 1 | 1765 | ST354 (CC-354) | [16] |
jejuni subsp. doylei 269.97 | 1.85 | 1 | 1982 | ST1845 (-) | TIGR |
coli RM2228 | 1.68 | 1 | 1715 | ST1063 (CC-828) | TIGR |
coli 6461 | 1.79 | 1 | 1885 | - (CC-828) | NCSU |
coli 11601 | 1.96 | 1 | 2091 | ST1149 (CC-282) | NCSU |
coli 6067 | 1.70 | 1 | 1786 | ST1150 (CC-1150) | NCSU |
coli JV20 | 1.71 | 34 | 1742 | ST860 (CC-828) | Baylor college |